Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 MIR557-201ENST00000385239 98 ntBASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 LYPLA2P1-203ENST00000447689 696 ntBASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 CHCHD2P9-201ENST00000461726 456 ntBASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AL627422.1-201ENST00000434104 580 ntBASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AP000358.1-201ENST00000456260 156 ntBASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AL022344.2-201ENST00000568976 968 ntBASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SIGLEC18P-201ENST00000602271 909 ntBASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 AC105137.3-201ENST00000617588 984 ntBASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTC1Q2NKJ3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 TMCO5B-205ENST00000530020 894 ntBASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTC1Q2NKJ3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms