Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 DDC-213ENST00000617822 1809 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC27Q2M243 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC27Q2M243 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 AP002353.1-201ENST00000528257 1599 ntBASIC18.91■□□□□ 0.62
CCDC27Q2M243 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.91■□□□□ 0.62
CCDC27Q2M243 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 KRT18P15-201ENST00000458108 1291 ntBASIC18.91■□□□□ 0.62
CCDC27Q2M243 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC27Q2M243 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC27Q2M243 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 PKD1P5-201ENST00000532415 10291 ntBASIC18.91■□□□□ 0.62
CCDC27Q2M243 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC27Q2M243 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 KRT8P24-201ENST00000560290 1559 ntBASIC18.9■□□□□ 0.62
CCDC27Q2M243 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CCT8L1P-201ENST00000465400 1674 ntBASIC18.9■□□□□ 0.62
CCDC27Q2M243 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 USP17L6P-201ENST00000382470 1197 ntBASIC18.9■□□□□ 0.62
CCDC27Q2M243 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 AL451050.2-201ENST00000606967 682 ntBASIC18.9■□□□□ 0.62
CCDC27Q2M243 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 AL157813.1-201ENST00000612996 587 ntBASIC18.9■□□□□ 0.62
CCDC27Q2M243 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC27Q2M243 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC27Q2M243 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.89■□□□□ 0.62
CCDC27Q2M243 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC27Q2M243 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CCDC27Q2M243 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC27Q2M243 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.89■□□□□ 0.62
CCDC27Q2M243 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AL928921.2-201ENST00000641325 2442 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms