Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RFX7Q2KHR2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC007686.3-201ENST00000619017 3487 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 USP17L6P-201ENST00000382470 1197 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 XBP1P1-201ENST00000436573 652 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 FTLP1-201ENST00000449155 526 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC124068.2-201ENST00000569473 1109 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 AC012044.1-201ENST00000603431 297 ntBASIC17.52■□□□□ 0.39
RFX7Q2KHR2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX7Q2KHR2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 AP002414.2-201ENST00000591780 3365 ntBASIC17.51■□□□□ 0.39
RFX7Q2KHR2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 AC019193.1-201ENST00000506678 823 ntBASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX7Q2KHR2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.5■□□□□ 0.39
RFX7Q2KHR2 LINC01165-201ENST00000445190 1623 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms