Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PES1P2-201ENST00000449745 1735 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 AC009132.1-201ENST00000565194 320 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 MIR6819-201ENST00000622122 61 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HSPG2P98160 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC8.67□□□□□ -1.02
HSPG2P98160 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 PCTP-206ENST00000573500 919 ntTSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 AL133551.1-201ENST00000610279 1222 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HSPG2P98160 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 ABCD1P4-201ENST00000399687 604 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC8.66□□□□□ -1.02
HSPG2P98160 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 RN7SL838P-201ENST00000481676 295 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC8.66□□□□□ -1.02
HSPG2P98160 HNRNPA1P56-201ENST00000505767 954 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 IGHV7-56-201ENST00000518372 351 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC8.66□□□□□ -1.02
HSPG2P98160 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC8.66□□□□□ -1.02
HSPG2P98160 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 AC008620.2-201ENST00000510294 1569 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC8.66□□□□□ -1.02
HSPG2P98160 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 AC007622.1-201ENST00000488371 535 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC8.66□□□□□ -1.02
HSPG2P98160 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
HSPG2P98160 DUX4L33-201ENST00000635217 958 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
HSPG2P98160 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HSPG2P98160 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HSPG2P98160 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 ACTBP14-201ENST00000411655 1089 ntBASIC8.66□□□□□ -1.02
HSPG2P98160 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC8.66□□□□□ -1.02
HSPG2P98160 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC8.66□□□□□ -1.02
HSPG2P98160 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HSPG2P98160 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms