Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.86□□□□□ -0.19
RPS3AP61247 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.86□□□□□ -0.19
RPS3AP61247 BX539320.1-201ENST00000623759 877 ntBASIC13.86□□□□□ -0.19
RPS3AP61247 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
RPS3AP61247 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 AC015818.8-201ENST00000587907 1519 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.85□□□□□ -0.19
RPS3AP61247 AL355864.2-201ENST00000447420 863 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 GPR53P-205ENST00000457298 1084 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.85□□□□□ -0.19
RPS3AP61247 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 GAPDHP40-201ENST00000505218 1006 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 KRT18P25-201ENST00000508931 1278 ntBASIC13.85□□□□□ -0.19
RPS3AP61247 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.85□□□□□ -0.19
RPS3AP61247 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.85□□□□□ -0.19
RPS3AP61247 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.85□□□□□ -0.19
RPS3AP61247 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
RPS3AP61247 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPS3AP61247 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS3AP61247 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS3AP61247 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms