Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 RPL5P21-201ENST00000404620 815 ntBASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AC016629.1-201ENST00000596579 586 ntBASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AP001505.2-201ENST00000616815 443 ntBASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CU633904.3-201ENST00000624042 1029 ntBASIC16.82■□□□□ 0.28
CHMP4BP1P59074 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 ELK2AP-201ENST00000392510 1007 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CHMP1AP1-201ENST00000445563 662 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 IMP3P2-201ENST00000489760 475 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 AC020910.5-201ENST00000623668 1865 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 INE2-201ENST00000630399 1874 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 AC015656.1-201ENST00000624209 3578 ntBASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP4BP1P59074 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP4BP1P59074 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms