Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLDN6P56747 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN6P56747 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CLDN6P56747 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN6P56747 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.02□□□□□ -0.16
CLDN6P56747 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.02□□□□□ -0.16
CLDN6P56747 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN6P56747 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN6P56747 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC090502.4-201ENST00000551714 1386 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 OR2R1P-201ENST00000441404 914 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 LYPLA2P1-203ENST00000447689 696 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CLDN6P56747 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CLDN6P56747 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CLDN6P56747 C2orf69P1-201ENST00000563532 1093 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDN6P56747 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN6P56747 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CLDN6P56747 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
CLDN6P56747 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN6P56747 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 AC136621.1-201ENST00000624017 2304 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN6P56747 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN6P56747 AC023024.2-201ENST00000623561 1993 ntBASIC14.02□□□□□ -0.17
CLDN6P56747 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 AL136379.1-201ENST00000623471 2642 ntBASIC14.01□□□□□ -0.17
CLDN6P56747 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN6P56747 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN6P56747 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN6P56747 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 RN7SL396P-201ENST00000471086 295 ntBASIC14.01□□□□□ -0.17
CLDN6P56747 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 AC130709.1-201ENST00000484779 1212 ntBASIC14.01□□□□□ -0.17
CLDN6P56747 ORAOV1P1-201ENST00000503108 395 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms