Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.03■□□□□ 0.48
AFDNP55196 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.03■□□□□ 0.48
AFDNP55196 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.03■□□□□ 0.48
AFDNP55196 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.03■□□□□ 0.48
AFDNP55196 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.03■□□□□ 0.48
AFDNP55196 AL133467.4-201ENST00000602953 725 ntBASIC18.03■□□□□ 0.48
AFDNP55196 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 CTBP2P8-201ENST00000422584 1330 ntBASIC18.03■□□□□ 0.48
AFDNP55196 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.03■□□□□ 0.48
AFDNP55196 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
AFDNP55196 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AFDNP55196 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.03■□□□□ 0.48
AFDNP55196 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AFDNP55196 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.03■□□□□ 0.48
AFDNP55196 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 KRT18P46-201ENST00000435568 1279 ntBASIC18.02■□□□□ 0.48
AFDNP55196 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.02■□□□□ 0.48
AFDNP55196 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.02■□□□□ 0.48
AFDNP55196 KLF17P1-201ENST00000547105 1126 ntBASIC18.02■□□□□ 0.48
AFDNP55196 AL132994.1-201ENST00000554098 400 ntBASIC18.02■□□□□ 0.48
AFDNP55196 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.02■□□□□ 0.48
AFDNP55196 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.02■□□□□ 0.48
AFDNP55196 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.02■□□□□ 0.48
AFDNP55196 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
AFDNP55196 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AFDNP55196 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.02■□□□□ 0.48
AFDNP55196 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.02■□□□□ 0.48
AFDNP55196 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AFDNP55196 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.02■□□□□ 0.48
AFDNP55196 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AFDNP55196 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.02■□□□□ 0.48
AFDNP55196 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AFDNP55196 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
AFDNP55196 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.02■□□□□ 0.47
AFDNP55196 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.02■□□□□ 0.47
AFDNP55196 RN7SL564P-201ENST00000496309 250 ntBASIC18.02■□□□□ 0.47
AFDNP55196 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.02■□□□□ 0.47
AFDNP55196 OR5BD1P-201ENST00000532527 817 ntBASIC18.02■□□□□ 0.47
AFDNP55196 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.02■□□□□ 0.47
AFDNP55196 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.02■□□□□ 0.47
AFDNP55196 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AFDNP55196 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.02■□□□□ 0.47
AFDNP55196 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AFDNP55196 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
AFDNP55196 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AFDNP55196 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
AFDNP55196 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.01■□□□□ 0.47
AFDNP55196 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.01■□□□□ 0.47
AFDNP55196 AL672207.1-201ENST00000328462 1570 ntBASIC18.01■□□□□ 0.47
AFDNP55196 AC232323.1-201ENST00000540724 2099 ntBASIC18.01■□□□□ 0.47
AFDNP55196 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
AFDNP55196 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
AFDNP55196 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 PPP1R2P4-201ENST00000424051 595 ntBASIC18.01■□□□□ 0.47
AFDNP55196 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.01■□□□□ 0.47
AFDNP55196 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 AP005264.6-204ENST00000588436 719 ntBASIC18.01■□□□□ 0.47
AFDNP55196 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AFDNP55196 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AFDNP55196 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.01■□□□□ 0.47
AFDNP55196 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms