Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 AC027237.1-201ENST00000560942 655 ntBASIC16.1■□□□□ 0.17
PMS1P54277 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.1■□□□□ 0.17
PMS1P54277 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.1■□□□□ 0.17
PMS1P54277 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.1■□□□□ 0.17
PMS1P54277 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PMS1P54277 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PMS1P54277 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PMS1P54277 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.09■□□□□ 0.17
PMS1P54277 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.09■□□□□ 0.17
PMS1P54277 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.09■□□□□ 0.17
PMS1P54277 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PMS1P54277 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.09■□□□□ 0.17
PMS1P54277 AC009093.10-201ENST00000641956 1442 ntBASIC16.09■□□□□ 0.17
PMS1P54277 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMS1P54277 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PMS1P54277 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PMS1P54277 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PMS1P54277 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.08■□□□□ 0.17
PMS1P54277 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PMS1P54277 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PMS1P54277 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PMS1P54277 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.08■□□□□ 0.17
PMS1P54277 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.08■□□□□ 0.17
PMS1P54277 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 MIR600HG-201ENST00000449175 5984 ntBASIC16.08■□□□□ 0.16
PMS1P54277 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.08■□□□□ 0.16
PMS1P54277 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 AL136309.1-201ENST00000403917 691 ntBASIC16.08■□□□□ 0.16
PMS1P54277 AC010141.1-201ENST00000411585 623 ntBASIC16.08■□□□□ 0.16
PMS1P54277 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.08■□□□□ 0.16
PMS1P54277 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMS1P54277 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.08■□□□□ 0.16
PMS1P54277 MIR3197-201ENST00000582241 73 ntBASIC16.08■□□□□ 0.16
PMS1P54277 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.08■□□□□ 0.16
PMS1P54277 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.08■□□□□ 0.16
PMS1P54277 AC027601.3-201ENST00000622907 509 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms