Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC00634-202ENST00000505157 222 ntBASIC14.41□□□□□ -0.1
LIMK1P53667 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.41□□□□□ -0.1
LIMK1P53667 MIR3180-2-201ENST00000581748 88 ntBASIC14.41□□□□□ -0.1
LIMK1P53667 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.41□□□□□ -0.1
LIMK1P53667 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.41□□□□□ -0.1
LIMK1P53667 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 AC133540.1-201ENST00000620845 1019 ntBASIC14.41□□□□□ -0.1
LIMK1P53667 AC144522.1-201ENST00000625111 1658 ntBASIC14.41□□□□□ -0.1
LIMK1P53667 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.41□□□□□ -0.1
LIMK1P53667 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LIMK1P53667 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 AC005840.4-201ENST00000541242 2494 ntBASIC14.4□□□□□ -0.1
LIMK1P53667 AJ011931.1-201ENST00000618749 2492 ntBASIC14.4□□□□□ -0.1
LIMK1P53667 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 RN7SKP230-201ENST00000365642 335 ntBASIC14.4□□□□□ -0.1
LIMK1P53667 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.4□□□□□ -0.1
LIMK1P53667 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 FAM86B3P-203ENST00000523992 854 ntBASIC14.4□□□□□ -0.1
LIMK1P53667 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LIMK1P53667 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
LIMK1P53667 CR383656.3-201ENST00000551315 183 ntBASIC14.4□□□□□ -0.1
LIMK1P53667 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.4□□□□□ -0.1
LIMK1P53667 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.4□□□□□ -0.1
LIMK1P53667 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.4□□□□□ -0.1
LIMK1P53667 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LIMK1P53667 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
LIMK1P53667 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIMK1P53667 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.4□□□□□ -0.1
LIMK1P53667 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.11
LIMK1P53667 AL122018.1-201ENST00000446607 2310 ntBASIC14.4□□□□□ -0.11
LIMK1P53667 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
LIMK1P53667 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 IL9RP3-201ENST00000442856 1674 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 MROH4P-201ENST00000431302 1578 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms