Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PI4KAP2-201ENST00000360806 2080 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 AP003969.2-201ENST00000623739 2275 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GTF2A1P52655 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AP002008.2-201ENST00000635926 4870 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GTF2A1P52655 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC129492.6-201ENST00000611383 1305 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.4□□□□□ -0.1
GTF2A1P52655 AL354861.3-201ENST00000600140 2412 ntBASIC14.4□□□□□ -0.1
GTF2A1P52655 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GTF2A1P52655 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.4□□□□□ -0.1
GTF2A1P52655 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.4□□□□□ -0.1
GTF2A1P52655 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.4□□□□□ -0.1
GTF2A1P52655 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GTF2A1P52655 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC14.39□□□□□ -0.11
GTF2A1P52655 AC011481.3-201ENST00000623895 5594 ntBASIC14.39□□□□□ -0.11
GTF2A1P52655 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC14.39□□□□□ -0.11
GTF2A1P52655 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
GTF2A1P52655 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
GTF2A1P52655 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 AC010970.1-201ENST00000445125 1848 ntBASIC14.39□□□□□ -0.11
GTF2A1P52655 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.39□□□□□ -0.11
GTF2A1P52655 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.39□□□□□ -0.11
GTF2A1P52655 RPS15P9-201ENST00000494093 319 ntBASIC14.39□□□□□ -0.11
GTF2A1P52655 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 AC025062.2-201ENST00000605477 670 ntBASIC14.39□□□□□ -0.11
GTF2A1P52655 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GTF2A1P52655 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC14.39□□□□□ -0.11
GTF2A1P52655 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GTF2A1P52655 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GTF2A1P52655 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GTF2A1P52655 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GTF2A1P52655 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms