Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLCN2P51788 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 AL645937.2-201ENST00000396808 931 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 BOLA2P3-201ENST00000404566 256 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 ACA64.2-201ENST00000459014 129 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 AP001889.1-201ENST00000525414 633 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC023794.5-201ENST00000564380 2157 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 SAMD11P1-201ENST00000571429 661 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.28□□□□□ -0.12
CLCN2P51788 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 AC017083.2-201ENST00000608069 979 ntBASIC14.28□□□□□ -0.12
CLCN2P51788 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.28□□□□□ -0.12
CLCN2P51788 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLCN2P51788 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLCN2P51788 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLCN2P51788 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLCN2P51788 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
CLCN2P51788 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
CLCN2P51788 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.27□□□□□ -0.12
CLCN2P51788 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.27□□□□□ -0.12
CLCN2P51788 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.27□□□□□ -0.12
CLCN2P51788 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 AC090505.1-201ENST00000430515 1834 ntBASIC14.27□□□□□ -0.12
CLCN2P51788 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CLCN2P51788 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLCN2P51788 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.27□□□□□ -0.12
CLCN2P51788 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLCN2P51788 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLCN2P51788 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCN2P51788 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCN2P51788 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms