Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VEGFBP49765 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VEGFBP49765 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.3■□□□□ 0.2
VEGFBP49765 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 AC010086.2-201ENST00000428616 226 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 ALDOAP1-201ENST00000491506 1078 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 AC233724.9-201ENST00000511694 407 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 AL136298.3-201ENST00000556746 445 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 AL603832.2-201ENST00000566195 2125 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 RN7SL455P-201ENST00000580629 282 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 RN7SL202P-201ENST00000584410 262 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.29■□□□□ 0.2
VEGFBP49765 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 SALL4P6-201ENST00000429385 1691 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.29■□□□□ 0.2
VEGFBP49765 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
VEGFBP49765 KRT8P43-201ENST00000406052 1458 ntBASIC16.29■□□□□ 0.2
VEGFBP49765 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.29■□□□□ 0.2
VEGFBP49765 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VEGFBP49765 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.28■□□□□ 0.2
VEGFBP49765 AC022211.2-201ENST00000585075 2527 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VEGFBP49765 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 LINC00115-201ENST00000473798 1317 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 AC090616.6-203ENST00000579186 1945 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VEGFBP49765 PPP1R2P10-201ENST00000393023 595 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 AL121949.1-201ENST00000402043 968 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.28■□□□□ 0.2
VEGFBP49765 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.28■□□□□ 0.2
VEGFBP49765 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.28■□□□□ 0.2
VEGFBP49765 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.28■□□□□ 0.2
VEGFBP49765 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.28■□□□□ 0.2
VEGFBP49765 AC132825.4-202ENST00000578792 434 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.28■□□□□ 0.2
VEGFBP49765 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VEGFBP49765 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 MEP1AP1-201ENST00000636082 1097 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.28■□□□□ 0.2
VEGFBP49765 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.28■□□□□ 0.2
VEGFBP49765 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.28■□□□□ 0.2
VEGFBP49765 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.28■□□□□ 0.2
VEGFBP49765 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VEGFBP49765 AC092115.1-201ENST00000566277 1402 ntBASIC16.28■□□□□ 0.2
VEGFBP49765 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
VEGFBP49765 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VEGFBP49765 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VEGFBP49765 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms