Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
MMP13P45452 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 SALL4P5-201ENST00000419001 1760 ntBASIC15.27■□□□□ 0.04
MMP13P45452 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MMP13P45452 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 TLE1P1-201ENST00000422965 589 ntBASIC15.27■□□□□ 0.04
MMP13P45452 FAM197Y7-201ENST00000432892 766 ntBASIC15.27■□□□□ 0.04
MMP13P45452 U91328.1-201ENST00000437528 223 ntBASIC15.27■□□□□ 0.04
MMP13P45452 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 MESTP3-201ENST00000503460 968 ntBASIC15.27■□□□□ 0.04
MMP13P45452 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MMP13P45452 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP13P45452 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 AC138466.3-201ENST00000619983 221 ntBASIC15.27■□□□□ 0.04
MMP13P45452 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.27■□□□□ 0.03
MMP13P45452 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 AC097376.2-205ENST00000610159 5334 ntBASIC15.27■□□□□ 0.03
MMP13P45452 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 PTENP1-202ENST00000532280 3996 ntBASIC15.27■□□□□ 0.03
MMP13P45452 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.27■□□□□ 0.03
MMP13P45452 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MMP13P45452 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP13P45452 AC003102.2-201ENST00000589195 1469 ntBASIC15.27■□□□□ 0.03
MMP13P45452 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 ST20-AS1-201ENST00000560255 4223 ntBASIC15.26■□□□□ 0.03
MMP13P45452 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 AC012617.1-204ENST00000586340 2305 ntBASIC15.26■□□□□ 0.03
MMP13P45452 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.26■□□□□ 0.03
MMP13P45452 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 AC234783.1-201ENST00000441761 496 ntBASIC15.26■□□□□ 0.03
MMP13P45452 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 FTLP10-202ENST00000505798 471 ntBASIC15.26■□□□□ 0.03
MMP13P45452 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
MMP13P45452 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.26■□□□□ 0.03
MMP13P45452 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 AC138951.2-201ENST00000623455 1161 ntBASIC15.26■□□□□ 0.03
MMP13P45452 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 TCAM1P-207ENST00000485295 1537 ntBASIC15.26■□□□□ 0.03
MMP13P45452 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
MMP13P45452 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP13P45452 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP13P45452 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms