Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.85■□□□□ 0.13
HTTP42858 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
HTTP42858 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.85■□□□□ 0.13
HTTP42858 DPY19L2P4-201ENST00000479881 442 ntBASIC15.85■□□□□ 0.13
HTTP42858 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.85■□□□□ 0.13
HTTP42858 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 TPST2P1-201ENST00000564073 1102 ntBASIC15.85■□□□□ 0.13
HTTP42858 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HTTP42858 RN7SL524P-201ENST00000581152 300 ntBASIC15.85■□□□□ 0.13
HTTP42858 AC005777.1-201ENST00000588332 187 ntBASIC15.85■□□□□ 0.13
HTTP42858 AL021707.6-201ENST00000609212 491 ntBASIC15.85■□□□□ 0.13
HTTP42858 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 RPSAP6-201ENST00000417882 882 ntBASIC15.84■□□□□ 0.13
HTTP42858 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC15.84■□□□□ 0.13
HTTP42858 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 AC126365.1-201ENST00000578585 1514 ntBASIC15.84■□□□□ 0.13
HTTP42858 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HTTP42858 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.84■□□□□ 0.13
HTTP42858 PRR20FP-201ENST00000603320 180 ntBASIC15.84■□□□□ 0.13
HTTP42858 KF455155.1-201ENST00000604493 303 ntBASIC15.84■□□□□ 0.13
HTTP42858 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HTTP42858 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.84■□□□□ 0.13
HTTP42858 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.84■□□□□ 0.13
HTTP42858 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HTTP42858 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.84■□□□□ 0.13
HTTP42858 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HTTP42858 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTTP42858 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HTTP42858 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HTTP42858 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.83■□□□□ 0.13
HTTP42858 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.83■□□□□ 0.13
HTTP42858 RN7SKP155-201ENST00000516031 288 ntBASIC15.83■□□□□ 0.13
HTTP42858 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.83■□□□□ 0.13
HTTP42858 RN7SL455P-201ENST00000580629 282 ntBASIC15.83■□□□□ 0.13
HTTP42858 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC15.83■□□□□ 0.13
HTTP42858 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC15.83■□□□□ 0.13
HTTP42858 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTTP42858 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HTTP42858 AC138035.3-201ENST00000622706 2791 ntBASIC15.83■□□□□ 0.13
HTTP42858 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HTTP42858 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.83■□□□□ 0.12
HTTP42858 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC15.83■□□□□ 0.12
HTTP42858 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.83■□□□□ 0.12
HTTP42858 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.83■□□□□ 0.12
HTTP42858 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.83■□□□□ 0.12
HTTP42858 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HTTP42858 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
HTTP42858 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HTTP42858 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HTTP42858 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HTTP42858 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTTP42858 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.82■□□□□ 0.12
HTTP42858 MIEF1-215ENST00000637854 213 ntBASIC15.82■□□□□ 0.12
HTTP42858 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms