Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TM4SF1P30408 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.77■□□□□ 0.44
TM4SF1P30408 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM4SF1P30408 AC008741.2-201ENST00000612792 3115 ntBASIC17.77■□□□□ 0.43
TM4SF1P30408 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 AC215219.1-201ENST00000400706 1817 ntBASIC17.77■□□□□ 0.43
TM4SF1P30408 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TM4SF1P30408 AL354702.1-201ENST00000442006 1960 ntBASIC17.77■□□□□ 0.43
TM4SF1P30408 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TM4SF1P30408 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM4SF1P30408 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TM4SF1P30408 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TM4SF1P30408 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 AC100858.1-201ENST00000514059 1228 ntBASIC17.76■□□□□ 0.43
TM4SF1P30408 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.76■□□□□ 0.43
TM4SF1P30408 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 RN7SL556P-201ENST00000582856 298 ntBASIC17.76■□□□□ 0.43
TM4SF1P30408 AL136982.5-201ENST00000605222 294 ntBASIC17.76■□□□□ 0.43
TM4SF1P30408 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 AL365181.1-201ENST00000564032 1828 ntBASIC17.76■□□□□ 0.43
TM4SF1P30408 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TM4SF1P30408 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.76■□□□□ 0.43
TM4SF1P30408 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.76■□□□□ 0.43
TM4SF1P30408 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM4SF1P30408 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC064801.2-201ENST00000625052 1303 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC138761.6-201ENST00000583997 1423 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TM4SF1P30408 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TM4SF1P30408 KRT18P4-201ENST00000422599 1288 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 SERBP1P2-201ENST00000436888 1164 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 KRT18P62-201ENST00000446618 1287 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 RN7SL288P-201ENST00000490496 291 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 SLC25A15P3-201ENST00000505530 290 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF1P30408 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TM4SF1P30408 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TM4SF1P30408 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TM4SF1P30408 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 RPL13AP3-202ENST00000494676 1473 ntBASIC17.75■□□□□ 0.43
TM4SF1P30408 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF1P30408 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms