Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PTPN3P26045 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.94□□□□□ -0.02
PTPN3P26045 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PTPN3P26045 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.94□□□□□ -0.02
PTPN3P26045 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN3P26045 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 E2F3P2-201ENST00000447755 1422 ntBASIC14.93□□□□□ -0.02
PTPN3P26045 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
PTPN3P26045 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.93□□□□□ -0.02
PTPN3P26045 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.93□□□□□ -0.02
PTPN3P26045 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.93□□□□□ -0.02
PTPN3P26045 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.93□□□□□ -0.02
PTPN3P26045 AC104989.1-201ENST00000519711 778 ntBASIC14.93□□□□□ -0.02
PTPN3P26045 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PTPN3P26045 MIR6775-201ENST00000617557 69 ntBASIC14.93□□□□□ -0.02
PTPN3P26045 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN3P26045 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN3P26045 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTPN3P26045 AC064801.2-201ENST00000625052 1303 ntBASIC14.92□□□□□ -0.02
PTPN3P26045 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN3P26045 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 AL023775.1-201ENST00000454907 1746 ntBASIC14.92□□□□□ -0.02
PTPN3P26045 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PTPN3P26045 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PTPN3P26045 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN3P26045 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN3P26045 AC100850.1-201ENST00000506768 649 ntBASIC14.92□□□□□ -0.02
PTPN3P26045 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN3P26045 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PTPN3P26045 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN3P26045 AC132192.2-201ENST00000596206 1147 ntBASIC14.92□□□□□ -0.02
PTPN3P26045 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.92□□□□□ -0.02
PTPN3P26045 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN3P26045 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms