Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.68□□□□□ -0.06
VCANP13611 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.68□□□□□ -0.06
VCANP13611 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 AC126755.5-201ENST00000622756 267 ntBASIC14.68□□□□□ -0.06
VCANP13611 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VCANP13611 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VCANP13611 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VCANP13611 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VCANP13611 TLE1P1-201ENST00000422965 589 ntBASIC14.67□□□□□ -0.06
VCANP13611 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 KRT8P28-201ENST00000433288 1390 ntBASIC14.67□□□□□ -0.06
VCANP13611 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.67□□□□□ -0.06
VCANP13611 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 RN7SL605P-201ENST00000577229 281 ntBASIC14.67□□□□□ -0.06
VCANP13611 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.67□□□□□ -0.06
VCANP13611 AC139100.2-201ENST00000616901 662 ntBASIC14.67□□□□□ -0.06
VCANP13611 AC073869.4-201ENST00000620841 800 ntBASIC14.67□□□□□ -0.06
VCANP13611 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VCANP13611 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
VCANP13611 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.67□□□□□ -0.06
VCANP13611 ODCP-201ENST00000459650 1639 ntBASIC14.67□□□□□ -0.06
VCANP13611 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 AL035414.1-201ENST00000451327 857 ntBASIC14.67□□□□□ -0.06
VCANP13611 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.67□□□□□ -0.06
VCANP13611 AC015818.3-201ENST00000583797 589 ntBASIC14.67□□□□□ -0.06
VCANP13611 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCANP13611 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.66□□□□□ -0.06
VCANP13611 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCANP13611 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.66□□□□□ -0.06
VCANP13611 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VCANP13611 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC14.66□□□□□ -0.06
VCANP13611 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
VCANP13611 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 AC233724.9-201ENST00000511694 407 ntBASIC14.66□□□□□ -0.06
VCANP13611 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 FAM213AP2-201ENST00000521579 683 ntBASIC14.66□□□□□ -0.06
VCANP13611 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.66□□□□□ -0.06
VCANP13611 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCANP13611 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.66□□□□□ -0.06
VCANP13611 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCANP13611 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCANP13611 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.66□□□□□ -0.06
VCANP13611 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms