Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC139712.1-201ENST00000378256 1875 ntBASIC17.22■□□□□ 0.35
TOP1P11387 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP1P11387 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP1P11387 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP1P11387 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TOP1P11387 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.21■□□□□ 0.35
TOP1P11387 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.21■□□□□ 0.35
TOP1P11387 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.21■□□□□ 0.35
TOP1P11387 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 AC138649.2-201ENST00000615886 705 ntBASIC17.21■□□□□ 0.35
TOP1P11387 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP1P11387 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP1P11387 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP1P11387 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP1P11387 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP1P11387 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TOP1P11387 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
TOP1P11387 AC117489.1-201ENST00000625169 3217 ntBASIC17.21■□□□□ 0.34
TOP1P11387 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP1P11387 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.21■□□□□ 0.34
TOP1P11387 INTS4P1-203ENST00000641008 3683 ntBASIC17.2■□□□□ 0.34
TOP1P11387 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.2■□□□□ 0.34
TOP1P11387 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TOP1P11387 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 KRT8P28-201ENST00000433288 1390 ntBASIC17.2■□□□□ 0.34
TOP1P11387 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP1P11387 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.2■□□□□ 0.34
TOP1P11387 AC016700.1-201ENST00000429424 312 ntBASIC17.2■□□□□ 0.34
TOP1P11387 FNTAP2-201ENST00000430308 634 ntBASIC17.2■□□□□ 0.34
TOP1P11387 VDAC1P1-201ENST00000439229 848 ntBASIC17.2■□□□□ 0.34
TOP1P11387 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP1P11387 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TOP1P11387 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 AC013355.1-201ENST00000562625 723 ntBASIC17.2■□□□□ 0.34
TOP1P11387 AC005962.1-201ENST00000584100 773 ntBASIC17.2■□□□□ 0.34
TOP1P11387 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 AP000346.4-201ENST00000614827 381 ntBASIC17.2■□□□□ 0.34
TOP1P11387 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.2■□□□□ 0.34
TOP1P11387 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms