Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CD28P10747 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC11.48□□□□□ -0.57
CD28P10747 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC11.48□□□□□ -0.57
CD28P10747 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.48□□□□□ -0.57
CD28P10747 GCOM2-201ENST00000509133 1104 ntBASIC11.48□□□□□ -0.57
CD28P10747 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
CD28P10747 IGLV3-15-201ENST00000518356 244 ntBASIC11.48□□□□□ -0.57
CD28P10747 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.48□□□□□ -0.57
CD28P10747 RTN3P1-201ENST00000536295 711 ntBASIC11.48□□□□□ -0.57
CD28P10747 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 AC012044.1-201ENST00000603431 297 ntBASIC11.48□□□□□ -0.57
CD28P10747 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC11.48□□□□□ -0.57
CD28P10747 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 FAM90A7P-201ENST00000382628 1395 ntBASIC11.48□□□□□ -0.57
CD28P10747 FAM90A23P-201ENST00000400136 1395 ntBASIC11.48□□□□□ -0.57
CD28P10747 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.48□□□□□ -0.57
CD28P10747 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 ZBED1P1-201ENST00000502364 1930 ntBASIC11.48□□□□□ -0.57
CD28P10747 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CD28P10747 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.48□□□□□ -0.57
CD28P10747 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD28P10747 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 AC013726.1-201ENST00000563747 2285 ntBASIC11.47□□□□□ -0.57
CD28P10747 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 AC007292.2-201ENST00000593524 1812 ntBASIC11.47□□□□□ -0.57
CD28P10747 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms