Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SFTPBP07988 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 RN7SL837P-201ENST00000463010 287 ntBASIC12.85□□□□□ -0.35
SFTPBP07988 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SFTPBP07988 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.85□□□□□ -0.35
SFTPBP07988 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.85□□□□□ -0.35
SFTPBP07988 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SFTPBP07988 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SFTPBP07988 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SFTPBP07988 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 RPL13AP25-201ENST00000484130 612 ntBASIC12.84□□□□□ -0.35
SFTPBP07988 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.84□□□□□ -0.35
SFTPBP07988 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.84□□□□□ -0.35
SFTPBP07988 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 BRI3BPP1-201ENST00000594224 787 ntBASIC12.84□□□□□ -0.35
SFTPBP07988 AC093813.1-201ENST00000605066 256 ntBASIC12.84□□□□□ -0.35
SFTPBP07988 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms