Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TPM2P07951 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM2P07951 TSEN15P1-201ENST00000423257 515 ntBASIC16.78■□□□□ 0.28
TPM2P07951 AP000347.1-202ENST00000435868 847 ntBASIC16.78■□□□□ 0.28
TPM2P07951 KLF2P3-201ENST00000451977 1087 ntBASIC16.78■□□□□ 0.28
TPM2P07951 AC004967.1-201ENST00000453589 447 ntBASIC16.78■□□□□ 0.28
TPM2P07951 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TPM2P07951 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.78■□□□□ 0.28
TPM2P07951 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM2P07951 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM2P07951 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM2P07951 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM2P07951 AC004449.1-201ENST00000564240 433 ntBASIC16.78■□□□□ 0.28
TPM2P07951 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TPM2P07951 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TPM2P07951 Z92544.3-201ENST00000624747 417 ntBASIC16.78■□□□□ 0.28
TPM2P07951 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM2P07951 AC134684.3-201ENST00000641758 218 ntBASIC16.78■□□□□ 0.28
TPM2P07951 AC079781.4-201ENST00000641908 219 ntBASIC16.78■□□□□ 0.28
TPM2P07951 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM2P07951 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 AC087499.5-201ENST00000452760 1342 ntBASIC16.77■□□□□ 0.28
TPM2P07951 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.77■□□□□ 0.28
TPM2P07951 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.77■□□□□ 0.28
TPM2P07951 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.77■□□□□ 0.28
TPM2P07951 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.77■□□□□ 0.28
TPM2P07951 AC027612.4-201ENST00000605371 583 ntBASIC16.77■□□□□ 0.28
TPM2P07951 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TPM2P07951 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.77■□□□□ 0.28
TPM2P07951 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM2P07951 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TPM2P07951 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TPM2P07951 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TPM2P07951 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TPM2P07951 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.77■□□□□ 0.27
TPM2P07951 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM2P07951 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM2P07951 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM2P07951 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
TPM2P07951 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TPM2P07951 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM2P07951 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM2P07951 AC067863.1-201ENST00000494933 530 ntBASIC16.76■□□□□ 0.27
TPM2P07951 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TPM2P07951 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM2P07951 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TPM2P07951 AC140878.1-201ENST00000565277 250 ntBASIC16.76■□□□□ 0.27
TPM2P07951 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM2P07951 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.76■□□□□ 0.27
TPM2P07951 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms