Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RETP07949 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RETP07949 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RETP07949 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 Z69890.1-201ENST00000382990 339 ntBASIC14.77□□□□□ -0.05
RETP07949 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.77□□□□□ -0.05
RETP07949 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.77□□□□□ -0.05
RETP07949 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.77□□□□□ -0.05
RETP07949 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.77□□□□□ -0.05
RETP07949 C2orf69P1-201ENST00000563532 1093 ntBASIC14.77□□□□□ -0.05
RETP07949 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.77□□□□□ -0.05
RETP07949 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.77□□□□□ -0.05
RETP07949 LINC01783-202ENST00000614408 828 ntBASIC14.77□□□□□ -0.05
RETP07949 BX284668.2-205ENST00000619677 828 ntBASIC14.77□□□□□ -0.05
RETP07949 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RETP07949 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.77□□□□□ -0.05
RETP07949 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.77□□□□□ -0.05
RETP07949 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RETP07949 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RETP07949 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.77□□□□□ -0.05
RETP07949 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
RETP07949 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RETP07949 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.77□□□□□ -0.05
RETP07949 AC084364.1-201ENST00000551967 1556 ntBASIC14.77□□□□□ -0.05
RETP07949 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RETP07949 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RETP07949 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 WASH3P-207ENST00000560956 1394 ntBASIC14.76□□□□□ -0.05
RETP07949 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RETP07949 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.76□□□□□ -0.05
RETP07949 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 FRMPD2B-201ENST00000431305 1347 ntBASIC14.76□□□□□ -0.05
RETP07949 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.76□□□□□ -0.05
RETP07949 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RETP07949 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 RPL5P21-201ENST00000404620 815 ntBASIC14.76□□□□□ -0.05
RETP07949 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.76□□□□□ -0.05
RETP07949 RPL18AP3-201ENST00000462885 528 ntBASIC14.76□□□□□ -0.05
RETP07949 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.76□□□□□ -0.05
RETP07949 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
RETP07949 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.76□□□□□ -0.05
RETP07949 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RETP07949 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RETP07949 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.76□□□□□ -0.05
RETP07949 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.76□□□□□ -0.05
RETP07949 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RETP07949 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RETP07949 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RETP07949 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RETP07949 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RETP07949 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.75□□□□□ -0.05
RETP07949 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RETP07949 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RETP07949 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms