Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GSN-209ENST00000449733 2702 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 AC092810.2-201ENST00000431570 362 ntBASIC8.76□□□□□ -1.01
APOBP04114 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 AC008021.1-201ENST00000474180 414 ntBASIC8.76□□□□□ -1.01
APOBP04114 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AL627095.1-201ENST00000414775 321 ntBASIC8.76□□□□□ -1.01
APOBP04114 SNRPCP15-201ENST00000424055 192 ntBASIC8.76□□□□□ -1.01
APOBP04114 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 DDX11L8-201ENST00000535849 366 ntBASIC8.76□□□□□ -1.01
APOBP04114 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AC134878.2-201ENST00000620700 1265 ntBASIC8.76□□□□□ -1.01
APOBP04114 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 AC068760.1-201ENST00000493579 1953 ntBASIC8.76□□□□□ -1.01
APOBP04114 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 AC026884.1-201ENST00000418296 457 ntBASIC8.76□□□□□ -1.01
APOBP04114 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 NEMF-210ENST00000556672 590 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC8.76□□□□□ -1.01
APOBP04114 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
APOBP04114 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC8.75□□□□□ -1.01
APOBP04114 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC8.75□□□□□ -1.01
APOBP04114 Z82244.2-201ENST00000632196 448 ntBASIC8.75□□□□□ -1.01
APOBP04114 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
APOBP04114 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 GUCY2EP-203ENST00000531117 1918 ntBASIC8.75□□□□□ -1.01
APOBP04114 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC8.75□□□□□ -1.01
APOBP04114 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
APOBP04114 GRPEL2P1-201ENST00000453145 339 ntBASIC8.75□□□□□ -1.01
APOBP04114 AL136298.3-201ENST00000556746 445 ntBASIC8.75□□□□□ -1.01
APOBP04114 AC005586.2-201ENST00000563946 837 ntBASIC8.75□□□□□ -1.01
APOBP04114 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC8.75□□□□□ -1.01
APOBP04114 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms