Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.72□□□□□ -0.53
APOC3P02656 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC3P02656 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC3P02656 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC3P02656 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 PKP4P1-201ENST00000426801 2158 ntBASIC11.72□□□□□ -0.53
APOC3P02656 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC3P02656 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
APOC3P02656 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC3P02656 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC3P02656 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 AL607033.1-201ENST00000623900 1599 ntBASIC11.71□□□□□ -0.53
APOC3P02656 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 PMS2P7-201ENST00000506558 1336 ntBASIC11.71□□□□□ -0.53
APOC3P02656 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
APOC3P02656 ABHD17AP1-201ENST00000358206 933 ntBASIC11.71□□□□□ -0.53
APOC3P02656 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
APOC3P02656 PMS2P4-201ENST00000412466 1052 ntBASIC11.71□□□□□ -0.53
APOC3P02656 AC246785.2-201ENST00000432512 513 ntBASIC11.71□□□□□ -0.53
APOC3P02656 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.71□□□□□ -0.53
APOC3P02656 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC3P02656 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 AC113410.3-201ENST00000623366 203 ntBASIC11.71□□□□□ -0.53
APOC3P02656 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC3P02656 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC3P02656 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC11.71□□□□□ -0.54
APOC3P02656 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
APOC3P02656 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC3P02656 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC3P02656 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
APOC3P02656 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC073439.1-201ENST00000624121 1774 ntBASIC11.7□□□□□ -0.54
APOC3P02656 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms