Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 DMBT1P1-203ENST00000636837 4628 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC245100.3-201ENST00000441281 285 ntBASIC13.29□□□□□ -0.28
PPP1R3DO95685 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 API5-211ENST00000534695 560 ntTSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC103988.2-201ENST00000561804 725 ntBASIC13.29□□□□□ -0.28
PPP1R3DO95685 MIR3197-201ENST00000582241 73 ntBASIC13.29□□□□□ -0.28
PPP1R3DO95685 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.29□□□□□ -0.28
PPP1R3DO95685 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC130686.1-201ENST00000622936 2466 ntBASIC13.29□□□□□ -0.28
PPP1R3DO95685 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PPP1R3DO95685 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.29□□□□□ -0.28
PPP1R3DO95685 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 MSTO2P-201ENST00000314835 1709 ntBASIC13.28□□□□□ -0.28
PPP1R3DO95685 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 FAM207CP-201ENST00000443486 507 ntBASIC13.28□□□□□ -0.28
PPP1R3DO95685 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.28□□□□□ -0.28
PPP1R3DO95685 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PPP1R3DO95685 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms