Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.31■■□□□ 1
RAPGEF3O95398 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC21.31■■□□□ 1
RAPGEF3O95398 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF3O95398 KRT19P4-201ENST00000443208 943 ntBASIC21.31■■□□□ 1
RAPGEF3O95398 RN7SL173P-201ENST00000461853 292 ntBASIC21.31■■□□□ 1
RAPGEF3O95398 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF3O95398 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RAPGEF3O95398 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF3O95398 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC21.31■■□□□ 1
RAPGEF3O95398 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.31■■□□□ 1
RAPGEF3O95398 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF3O95398 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF3O95398 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF3O95398 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAPGEF3O95398 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF3O95398 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF3O95398 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
RAPGEF3O95398 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAPGEF3O95398 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
RAPGEF3O95398 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
RAPGEF3O95398 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
RAPGEF3O95398 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.3■■□□□ 1
RAPGEF3O95398 DKKL1P1-201ENST00000400550 698 ntBASIC21.3■■□□□ 1
RAPGEF3O95398 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 MED15P3-201ENST00000413613 326 ntBASIC21.3■■□□□ 1
RAPGEF3O95398 SNRPCP15-201ENST00000424055 192 ntBASIC21.3■■□□□ 1
RAPGEF3O95398 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC21.3■■□□□ 1
RAPGEF3O95398 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC21.3■■□□□ 1
RAPGEF3O95398 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC21.3■■□□□ 1
RAPGEF3O95398 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.3■■□□□ 1
RAPGEF3O95398 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RAPGEF3O95398 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC21.3■■□□□ 1
RAPGEF3O95398 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC21.3■■□□□ 1
RAPGEF3O95398 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC21.3■■□□□ 1
RAPGEF3O95398 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF3O95398 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF3O95398 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF3O95398 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF3O95398 ABCD1P4-201ENST00000399687 604 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC21.29■■□□□ 1
RAPGEF3O95398 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 AL136084.1-201ENST00000449172 318 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 RNU1-80P-201ENST00000459500 161 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC21.29■■□□□ 1
RAPGEF3O95398 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC21.29■■□□□ 1
RAPGEF3O95398 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.29■■□□□ 1
RAPGEF3O95398 AC132812.1-201ENST00000583145 892 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 ACTBP9-201ENST00000587663 1099 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 AL031673.1-201ENST00000611460 466 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 AC136621.1-201ENST00000624017 2304 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF3O95398 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF3O95398 AL008638.4-201ENST00000624792 1315 ntBASIC21.29■■□□□ 1
RAPGEF3O95398 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF3O95398 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RAPGEF3O95398 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAPGEF3O95398 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.28■■□□□ 1
RAPGEF3O95398 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAPGEF3O95398 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF3O95398 GH1-203ENST00000351388 685 ntTSL 2 BASIC21.28■■□□□ 1
RAPGEF3O95398 HDGF-202ENST00000368206 960 ntTSL 5 BASIC21.28■■□□□ 1
RAPGEF3O95398 OR2W2P-201ENST00000406313 909 ntBASIC21.28■■□□□ 1
RAPGEF3O95398 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC21.28■■□□□ 1
RAPGEF3O95398 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms