Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SNAI2O43623 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 DNM1P41-201ENST00000623634 3350 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 AC090505.1-201ENST00000430515 1834 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SNAI2O43623 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.05□□□□□ -0.64
SNAI2O43623 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.05□□□□□ -0.64
SNAI2O43623 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 ALG1L5P-201ENST00000482043 771 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 TMEM198B-204ENST00000484016 896 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.05□□□□□ -0.64
SNAI2O43623 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 KRT8P24-201ENST00000560290 1559 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 AC120114.3-201ENST00000611923 658 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
SNAI2O43623 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 AC106818.1-201ENST00000623223 3242 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 AL157414.3-201ENST00000624276 1954 ntBASIC11.05□□□□□ -0.64
SNAI2O43623 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SNAI2O43623 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms