Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHD2O14647 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD2O14647 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD2O14647 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHD2O14647 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD2O14647 MPV17-209ENST00000405983 859 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 AC079250.1-201ENST00000456046 531 ntBASIC19.56■□□□□ 0.72
CHD2O14647 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 SRPK2P-201ENST00000523408 1100 ntBASIC19.56■□□□□ 0.72
CHD2O14647 MBP-230ENST00000528160 584 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 GRAMD4P6-201ENST00000556999 244 ntBASIC19.56■□□□□ 0.72
CHD2O14647 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 PRR20FP-201ENST00000603320 180 ntBASIC19.56■□□□□ 0.72
CHD2O14647 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.56■□□□□ 0.72
CHD2O14647 AC048382.6-201ENST00000621980 1223 ntBASIC19.56■□□□□ 0.72
CHD2O14647 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD2O14647 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CHD2O14647 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD2O14647 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD2O14647 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD2O14647 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD2O14647 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHD2O14647 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.55■□□□□ 0.72
CHD2O14647 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHD2O14647 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.55■□□□□ 0.72
CHD2O14647 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 AC010086.2-201ENST00000428616 226 ntBASIC19.55■□□□□ 0.72
CHD2O14647 B9D1-206ENST00000461069 923 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC19.55■□□□□ 0.72
CHD2O14647 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHD2O14647 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 AC103702.1-201ENST00000548801 2630 ntBASIC19.55■□□□□ 0.72
CHD2O14647 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD2O14647 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD2O14647 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHD2O14647 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHD2O14647 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.54■□□□□ 0.72
CHD2O14647 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 HDGF-202ENST00000368206 960 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD2O14647 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 AC008494.1-201ENST00000497612 796 ntBASIC19.54■□□□□ 0.72
CHD2O14647 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC19.54■□□□□ 0.72
CHD2O14647 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC19.54■□□□□ 0.72
CHD2O14647 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC19.54■□□□□ 0.72
CHD2O14647 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms