Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM38O00635 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TRIM38O00635 AL391280.1-201ENST00000506969 1062 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 AC022616.1-201ENST00000518688 554 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM38O00635 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 SAMD11P1-201ENST00000571429 661 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM38O00635 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM38O00635 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 AC005252.3-201ENST00000623855 2258 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 AP000845.1-201ENST00000581677 2131 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 AC018529.2-202ENST00000611482 3087 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM38O00635 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM38O00635 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 GHSR-202ENST00000427970 912 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 NKAIN1P1-201ENST00000435754 582 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM38O00635 EIF4HP1-201ENST00000453115 687 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 AC044849.1-201ENST00000519737 1188 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 AC105129.2-201ENST00000559536 390 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 AC079328.1-201ENST00000560358 952 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 NDUFV2P1-201ENST00000596415 907 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM38O00635 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM38O00635 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 MBLAC2-202ENST00000514906 1936 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 AC152010.1-201ENST00000415779 2006 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 AP001267.2-201ENST00000532619 2086 ntBASIC14.81□□□□□ -0.04
TRIM38O00635 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRIM38O00635 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM38O00635 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM38O00635 AL359881.3-201ENST00000602640 1721 ntBASIC14.8□□□□□ -0.04
TRIM38O00635 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms