Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AL138725.1-201ENST00000407347 1314 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AC011742.3-201ENST00000439053 820 ntBASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 SPTLC1P5-201ENST00000450718 252 ntBASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 DUX4L46-201ENST00000566845 751 ntBASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA3F8WFD2 AC015656.1-201ENST00000624209 3578 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AL008707.1-201ENST00000422498 534 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AL133466.1-201ENST00000447582 150 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms