Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 COX5BP8-201ENST00000416911 349 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CD8B2-202ENST00000417670 633 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 RN7SL752P-201ENST00000463779 287 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 AC005225.4-201ENST00000557330 545 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 MIR5189-201ENST00000577370 114 ntBASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
FAM90A16PA6NEW6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
FAM90A16PA6NEW6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
FAM90A16PA6NEW6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.33□□□□□ -0.43
FAM90A16PA6NEW6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
FAM90A16PA6NEW6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
FAM90A16PA6NEW6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 RPSAP52-203ENST00000622976 1023 ntBASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM90A16PA6NEW6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms