Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 DUX4L27-201ENST00000554796 1261 ntBASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 AC120045.2-201ENST00000567334 178 ntBASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 AL691403.2-201ENST00000618460 490 ntBASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 CICP16-201ENST00000502609 2813 ntBASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GOLGA6L4A6NEF3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.02■□□□□ 0.31
GOLGA6L4A6NEF3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GOLGA6L4A6NEF3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.02■□□□□ 0.31
GOLGA6L4A6NEF3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.02■□□□□ 0.31
GOLGA6L4A6NEF3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MRPL37P1-201ENST00000592451 1337 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 AC215219.1-201ENST00000400706 1817 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 RNU1-114P-201ENST00000365297 166 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 C1QBPP1-201ENST00000400117 770 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MIR1233-2-201ENST00000408138 82 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MIR1233-1-201ENST00000408722 82 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 BRI3BPP1-201ENST00000594224 787 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MIR6074-201ENST00000612054 107 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 AC005252.3-201ENST00000623855 2258 ntBASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.01■□□□□ 0.31
GOLGA6L4A6NEF3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 GIMAP3P-201ENST00000495150 836 ntBASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17■□□□□ 0.31
GOLGA6L4A6NEF3 RRP7BP-205ENST00000566851 833 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms