Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 TMEM14DP-201ENST00000422205 345 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 TTTY23B-201ENST00000442790 549 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AC026410.3-201ENST00000514280 936 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 ENPP7P5-201ENST00000541031 1031 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AC120045.2-201ENST00000567334 178 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AC010319.3-201ENST00000597028 470 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 AL162274.1-201ENST00000617191 1098 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 CU634019.7-201ENST00000624153 1185 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 FP236241.2-201ENST00000624906 1185 ntBASIC13.31□□□□□ -0.28
TMEM129A0AVI4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM129A0AVI4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AC079776.1-201ENST00000401540 1152 ntBASIC13.3□□□□□ -0.28
TMEM129A0AVI4 ACTG1P3-201ENST00000431775 1114 ntBASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AL162726.2-201ENST00000438986 1017 ntBASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AC106886.1-201ENST00000568660 600 ntBASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 AC111170.3-201ENST00000624282 2464 ntBASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM129A0AVI4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM129A0AVI4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.29□□□□□ -0.28
TMEM129A0AVI4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms