Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MRPL20P1-201ENST00000400819 433 ntBASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TPSP2-201ENST00000561760 610 ntBASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MIR6074-201ENST00000612054 107 ntBASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 GHET1-201ENST00000627071 1906 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC011700.1-201ENST00000610409 2627 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AZGP1P1-201ENST00000411909 902 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 RBM17P3-201ENST00000417687 1192 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC00265-3P-201ENST00000447588 903 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC104819.1-201ENST00000504587 486 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC115284.2-201ENST00000624646 2054 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AC016734.2-201ENST00000624325 1377 ntBASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms