Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC092135.3-201ENST00000624151 1846 ntBASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 FO681548.1-201ENST00000455617 1132 ntBASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC093433.1-201ENST00000458048 571 ntBASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 AC022137.2-201ENST00000503482 481 ntBASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 TDH-203ENST00000531764 1110 ntBASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TP53TG3HP-202ENST00000569755 579 ntBASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 AC015802.1-201ENST00000588104 1449 ntBASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR1DQ9Y2S0 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms