Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 CD82-202ENST00000342935 967 ntTSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AL391647.1-201ENST00000395664 511 ntBASIC14□□□□□ -0.17
LRCH1Q9Y2L9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AP002472.1-201ENST00000577490 586 ntBASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AP001160.2-201ENST00000596071 487 ntBASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AC074044.1-201ENST00000609673 707 ntBASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 AC009474.1-201ENST00000455096 1565 ntBASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRCH1Q9Y2L9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms