Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF8Q9UPP1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 AC018442.1-201ENST00000421439 2061 ntBASIC19.55■□□□□ 0.72
PHF8Q9UPP1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 AL109809.1-201ENST00000418979 1367 ntBASIC19.55■□□□□ 0.72
PHF8Q9UPP1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF8Q9UPP1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 LINC00115-201ENST00000473798 1317 ntBASIC19.54■□□□□ 0.72
PHF8Q9UPP1 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 KRT18P37-201ENST00000520711 1282 ntBASIC19.54■□□□□ 0.72
PHF8Q9UPP1 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AL132994.1-201ENST00000554098 400 ntBASIC19.54■□□□□ 0.72
PHF8Q9UPP1 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 MIR4265-201ENST00000582152 99 ntBASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AL009176.1-201ENST00000607876 650 ntBASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF8Q9UPP1 AC091951.1-201ENST00000512854 2465 ntBASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PTGER4P2-201ENST00000328411 252 ntBASIC19.53■□□□□ 0.72
PHF8Q9UPP1 OR7E115P-201ENST00000382617 1024 ntBASIC19.53■□□□□ 0.72
PHF8Q9UPP1 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PTGER4P3-201ENST00000458150 252 ntBASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms