Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 BCAS2P2-201ENST00000425064 674 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 RPL8P2-201ENST00000430538 502 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 USP9YP14-201ENST00000430663 563 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AL512661.1-201ENST00000434586 1253 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 GAPDHP40-201ENST00000505218 1006 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 MIR5196-201ENST00000578146 115 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC092299.1-201ENST00000632679 757 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 AC092364.2-201ENST00000596710 2692 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AF228730.1-201ENST00000397972 663 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC097493.2-201ENST00000468675 780 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RPS3AP15-201ENST00000483874 781 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RN7SL67P-201ENST00000492147 296 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC105233.1-201ENST00000498840 781 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 OR4A18P-201ENST00000529103 1088 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RPL17P45-201ENST00000586289 509 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC006449.6-201ENST00000612330 2296 ntBASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms