Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 AC087386.2-201ENST00000623212 4637 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AP006288.1-201ENST00000446065 395 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC004967.1-201ENST00000453589 447 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 FO681548.1-201ENST00000455617 1132 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC135586.1-201ENST00000539323 574 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC023310.3-201ENST00000557027 670 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC100756.1-201ENST00000562736 682 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC138749.3-201ENST00000567691 622 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC116165.1-201ENST00000611806 668 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AC134684.3-201ENST00000641758 218 ntBASIC16.4■□□□□ 0.22
CBX8Q9HC52 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX8Q9HC52 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX8Q9HC52 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CBX8Q9HC52 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.39■□□□□ 0.22
CBX8Q9HC52 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.39■□□□□ 0.22
CBX8Q9HC52 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 TSEN15P1-201ENST00000423257 515 ntBASIC16.39■□□□□ 0.21
CBX8Q9HC52 RPL13AP25-201ENST00000484130 612 ntBASIC16.39■□□□□ 0.21
CBX8Q9HC52 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 AL022313.4-201ENST00000562756 2046 ntBASIC16.39■□□□□ 0.21
CBX8Q9HC52 INTS4P2-202ENST00000614726 2019 ntBASIC16.39■□□□□ 0.21
CBX8Q9HC52 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CBX8Q9HC52 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX8Q9HC52 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms