Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC067750.1-201ENST00000608826 6545 ntBASIC14.65□□□□□ -0.06
MRM3Q9HC36 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 AC132192.2-201ENST00000596206 1147 ntBASIC14.65□□□□□ -0.06
MRM3Q9HC36 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.65□□□□□ -0.06
MRM3Q9HC36 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRM3Q9HC36 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.65□□□□□ -0.07
MRM3Q9HC36 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 AC079316.1-201ENST00000548397 411 ntBASIC14.64□□□□□ -0.07
MRM3Q9HC36 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.64□□□□□ -0.07
MRM3Q9HC36 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRM3Q9HC36 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.63□□□□□ -0.07
MRM3Q9HC36 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.63□□□□□ -0.07
MRM3Q9HC36 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
MRM3Q9HC36 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MRM3Q9HC36 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 AC015818.8-201ENST00000587907 1519 ntBASIC14.63□□□□□ -0.07
MRM3Q9HC36 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MRM3Q9HC36 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRM3Q9HC36 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms