Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AHCYP2-201ENST00000430630 1300 ntBASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 TUBB8P4-201ENST00000511806 1324 ntBASIC14.03□□□□□ -0.16
BRF2Q9HAW0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.03□□□□□ -0.16
BRF2Q9HAW0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BRF2Q9HAW0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC112492.5-201ENST00000421897 457 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 KRT17P7-201ENST00000451704 1104 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 CR383656.12-201ENST00000549567 513 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC104506.1-201ENST00000609247 429 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 SBF1P1-201ENST00000444527 5631 ntBASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BRF2Q9HAW0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 SHC1P1-201ENST00000425230 1745 ntBASIC14.01□□□□□ -0.17
BRF2Q9HAW0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BRF2Q9HAW0 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms