Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RSPO3Q9BXY4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
RSPO3Q9BXY4 NCLP1-201ENST00000445357 1963 ntBASIC13.4□□□□□ -0.27
RSPO3Q9BXY4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 AL022328.1-201ENST00000610050 478 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 AC073869.1-201ENST00000415574 2762 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SHC1P1-201ENST00000425230 1745 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 REXO1L6P-201ENST00000603433 1515 ntBASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO3Q9BXY4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 C2orf27AP3-201ENST00000434123 579 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CNN2P10-201ENST00000443067 918 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 HIST2H2BB-201ENST00000449108 381 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms