Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC090505.1-201ENST00000430515 1834 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 USP32P1-208ENST00000506594 1164 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC026410.3-201ENST00000514280 936 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC022447.6-201ENST00000515522 438 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 BTNL10-201ENST00000595971 695 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AL359881.2-201ENST00000602973 570 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC107373.2-201ENST00000607735 490 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 AC017083.2-201ENST00000608069 979 ntBASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1CQ9BQE3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 AL512343.1-201ENST00000605837 169 ntBASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms