Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 AL359183.1-201ENST00000623796 2132 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.44□□□□□ -0.1
NPAS2Q99743 AC004066.1-201ENST00000502488 802 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.44□□□□□ -0.1
NPAS2Q99743 USP32P1-208ENST00000506594 1164 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.44□□□□□ -0.1
NPAS2Q99743 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.44□□□□□ -0.1
NPAS2Q99743 AC133539.2-201ENST00000604757 467 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 CU634019.7-201ENST00000624153 1185 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 FP236241.2-201ENST00000624906 1185 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.44□□□□□ -0.1
NPAS2Q99743 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 AC005562.1-201ENST00000583030 3219 ntBASIC14.43□□□□□ -0.1
NPAS2Q99743 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPAS2Q99743 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPAS2Q99743 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.43□□□□□ -0.1
NPAS2Q99743 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPAS2Q99743 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPAS2Q99743 AC134915.1-201ENST00000426461 574 ntBASIC14.43□□□□□ -0.1
NPAS2Q99743 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.43□□□□□ -0.1
NPAS2Q99743 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.43□□□□□ -0.1
NPAS2Q99743 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.43□□□□□ -0.1
NPAS2Q99743 AC120045.2-201ENST00000567334 178 ntBASIC14.43□□□□□ -0.1
NPAS2Q99743 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPAS2Q99743 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.43□□□□□ -0.1
NPAS2Q99743 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NPAS2Q99743 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
NPAS2Q99743 AC027612.1-201ENST00000445234 2395 ntBASIC14.42□□□□□ -0.1
NPAS2Q99743 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 AL162726.2-201ENST00000438986 1017 ntBASIC14.42□□□□□ -0.1
NPAS2Q99743 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 MIR5189-201ENST00000577370 114 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms