Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AL157414.3-201ENST00000624276 1954 ntBASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AC108751.1-201ENST00000490852 363 ntBASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AL031719.1-201ENST00000623365 2587 ntBASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 AC125807.2-201ENST00000513358 3514 ntBASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3IPQ96QF0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 KRT18P8-201ENST00000581937 1246 ntBASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 AC027307.2-201ENST00000591252 911 ntBASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 FAM215A-202ENST00000632077 792 ntBASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 TUBB8P4-201ENST00000511806 1324 ntBASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 AL355102.3-201ENST00000554299 1678 ntBASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3IPQ96QF0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms