Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 PCDHA5-203ENST00000614258 4248 ntBASIC13.09□□□□□ -0.31
RFT1Q96AA3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.08□□□□□ -0.31
RFT1Q96AA3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.08□□□□□ -0.31
RFT1Q96AA3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFT1Q96AA3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC067863.1-201ENST00000494933 530 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SPDYE18-201ENST00000510091 1050 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC000095.1-201ENST00000603208 874 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 AL158211.3-201ENST00000607385 239 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 AL390754.1-201ENST00000619088 582 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AC068760.1-201ENST00000493579 1953 ntBASIC13.08□□□□□ -0.32
RFT1Q96AA3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFT1Q96AA3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.08□□□□□ -0.32
RFT1Q96AA3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 AC018665.1-201ENST00000622927 1362 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 AC118758.2-201ENST00000614242 2813 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms