Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HPS1Q92902 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 AP001972.5-201ENST00000624624 2338 ntBASIC13.61□□□□□ -0.23
HPS1Q92902 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HPS1Q92902 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HPS1Q92902 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HPS1Q92902 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.61□□□□□ -0.23
HPS1Q92902 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 MTND6P24-201ENST00000440466 518 ntBASIC13.61□□□□□ -0.23
HPS1Q92902 SPTLC1P1-201ENST00000447199 261 ntBASIC13.61□□□□□ -0.23
HPS1Q92902 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC13.61□□□□□ -0.23
HPS1Q92902 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC13.61□□□□□ -0.23
HPS1Q92902 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HPS1Q92902 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
HPS1Q92902 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.61□□□□□ -0.23
HPS1Q92902 BTBD7P1-201ENST00000447253 1453 ntBASIC13.61□□□□□ -0.23
HPS1Q92902 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HPS1Q92902 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.61□□□□□ -0.23
HPS1Q92902 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HPS1Q92902 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.6□□□□□ -0.23
HPS1Q92902 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HPS1Q92902 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.6□□□□□ -0.23
HPS1Q92902 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HPS1Q92902 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HPS1Q92902 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms