Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.02■□□□□ -0
PTCD2Q8WV60 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.02■□□□□ -0
PTCD2Q8WV60 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.02■□□□□ -0
PTCD2Q8WV60 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.02■□□□□ -0
PTCD2Q8WV60 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.02■□□□□ -0
PTCD2Q8WV60 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC15.02■□□□□ -0
PTCD2Q8WV60 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 AC097376.2-205ENST00000610159 5334 ntBASIC15.02□□□□□ -0.01
PTCD2Q8WV60 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCD2Q8WV60 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 MRPL37P1-201ENST00000592451 1337 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 FO681548.1-201ENST00000455617 1132 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 MESTP3-201ENST00000503460 968 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 RNU6-362P-201ENST00000516736 90 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC021269.1-201ENST00000526860 705 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC138951.2-201ENST00000623455 1161 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AP002371.2-201ENST00000624450 503 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC009039.2-201ENST00000624524 529 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 RHOXF1P1-202ENST00000635473 501 ntBASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PTCD2Q8WV60 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms