Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AL080243.2-201ENST00000418783 582 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 GPS2P2-201ENST00000430745 888 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AC004066.1-201ENST00000502488 802 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MIR4453-201ENST00000584019 89 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MIR6080-201ENST00000617359 66 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AL157414.3-201ENST00000624276 1954 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AC072061.1-201ENST00000569710 2234 ntBASIC12.74□□□□□ -0.37
BEST4Q8NFU0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AC074044.1-201ENST00000609673 707 ntBASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AL513210.1-201ENST00000629608 234 ntBASIC12.74□□□□□ -0.37
BEST4Q8NFU0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms